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pycromanager is a python package that enables control of micro-manager as well as the simple development of customized experiments that involve microscope hardware control integrated with real-time image processing. More information can be found in the publication.

Overview of pycro-manager

Pycro-manager architecture overview. (Grey) The existing parts of µManager provide generic microscope control abstracted from specific hardware, a graphical user interface (GUI), a Java plugin interface, and an acquisition engine, which automates various aspects of data collection. (Orange) Pycro-Manager enables access to these components through Python over a network-compatible transport layer, as well as a concise, high-level programming interface for acquiring data. These provide integration of data acquisition with (purple) Python libraries for hardware control, data visualization, scientific computing, etc.

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